Geschmack ist vorhersagbar: Mit FlavorMiner. FlavorMiner heißt das Tool, das IPB-Chemiker und Partner aus Kolumbien jüngst entwickelt haben. Das Programm kann, basierend auf maschinellem Lernen (KI), anhand der…
Seit Februar 2021 bietet Wolfgang Brandt, ehemaliger Leiter der Arbeitsgruppe Computerchemie am IPB, sein Citizen Science-Projekt zur Pilzbestimmung an. Dafür hat er in regelmäßigen Abständen öffentliche Vorträge zur Vielfalt…
The Lotus japonicus SYMBIOSIS RECEPTOR-LIKE KINASE (SYMRK) is required for symbiotic signal transduction upon stimulation of root cells by microbial signaling molecules. Here, we identified members of the SEVEN IN ABSENTIA (SINA) E3 ubiquitin-ligase family as SYMRK interactors and confirmed their predicted ubiquitin-ligase activity. In Nicotiana benthamiana leaves, SYMRK–yellow fluorescent protein was localized at the plasma membrane, and interaction with SINAs, as determined by bimolecular fluorescence complementation, was observed in small punctae at the cytosolic interface of the plasma membrane. Moreover, fluorescence-tagged SINA4 partially colocalized with SYMRK and caused SYMRK relocalization as well as disappearance of SYMRK from the plasma membrane. Neither the localization nor the abundance of Nod-factor receptor1 was altered by the presence of SINA4. SINA4 was transcriptionally upregulated during root symbiosis, and rhizobia inoculated roots ectopically expressing SINA4 showed reduced SYMRK protein levels. In accordance with a negative regulatory role in symbiosis, infection thread development was impaired upon ectopic expression of SINA4. Our results implicate SINA4 E3 ubiquitin ligase in the turnover of SYMRK and provide a conceptual mechanism for its symbiosis-appropriate spatio-temporal containment.
Publikation
de Gouveia Baratelli, T.; Candido Gomes, A. C.; Wessjohann, L. A.; Machado Kuster, R.; Kato Simas, N.;Phytochemical and allelopathic studies of Terminalia catappa L. (Combretaceae)Biochem. Syst. Ecol.41119-125(2012)DOI: 10.1016/j.bse.2011.12.008
The allelopathic potential of Terminalia catappa L. Combretaceae fruits and leaves on Lactuca sativa L. (lettuce), Euphorbia heterophylla L. and Commelina benghalensis L. was studied. Bioassays indicated the highest activity for dichloromethane and ethyl-acetate fractions of ethanolic extracts from fruits, and the mean effective concentration (EC50) was determined. 2-Pentadecanone; vanillic, siringic, ferulic, p-coumaric, palmitic and stearic acids were characterized in the dichloromethane fraction, and 3,4,4′-tri-O-methyl ellagic acid and β-sitosterol-3-O-β-d-glucoside were isolated from it. No allelopathic effects were observed when the dichloromethane extracts of T. catappa fruit or leaf extracts were applied to the weeds E. heterophylla and C. benghalensis. Bioassays with seasonal sampling revealed an influence on the allelochemical potential of T. catappa. Considering the methodology adopted and the experimental results, the allelopathic activity of T. catappa seems to be related to the interaction of different groups of substances, some of them identified and characterized in this work.
Publikation
Thien, D. G.; Hoang Anh, N. T.; Porzel, A.; Franke, K.; Wessjohann, L.; Van Sung, T.;Triterpene acids and polyphenols from Eriobotrya poilaneiBiochem. Syst. Ecol.40198-200(2012)DOI: 10.1016/j.bse.2011.11.001
The occurrence of flavolignans might be a valuable chemotaxonomic marker for the classification of Rosaceae species.
Publikation
Stegmann, M.; Anderson, R. G.; Ichimura, K.; Pecenkova, T.; Reuter, P.; Žárský, V.; McDowell, J. M.; Shirasu, K.; Trujillo, M.;The Ubiquitin Ligase PUB22 Targets a Subunit of the Exocyst Complex Required for PAMP-Triggered Responses in ArabidopsisPlant Cell244703-4716(2012)DOI: 10.1105/tpc.112.104463
Plant pathogens are perceived by pattern recognition receptors, which are activated upon binding to pathogen-associated molecular patterns (PAMPs). Ubiquitination and vesicle trafficking have been linked to the regulation of immune signaling. However, little information exists about components of vesicle trafficking involved in immune signaling and the mechanisms that regulate them. In this study, we identified Arabidopsis thaliana Exo70B2, a subunit of the exocyst complex that mediates vesicle tethering during exocytosis, as a target of the plant U-box–type ubiquitin ligase 22 (PUB22), which acts in concert with PUB23 and PUB24 as a negative regulator of PAMP-triggered responses. We show that Exo70B2 is required for both immediate and later responses triggered by all tested PAMPs, suggestive of a role in signaling. Exo70B2 is also necessary for the immune response against different pathogens. Our data demonstrate that PUB22 mediates the ubiquitination and degradation of Exo70B2 via the 26S Proteasome. Furthermore, degradation is regulated by the autocatalytic turnover of PUB22, which is stabilized upon PAMP perception. We therefore propose a mechanism by which PUB22-mediated degradation of Exo70B2 contributes to the attenuation of PAMP-induced signaling.