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| Authors | Title | Publication | Volume | Booktitle | Editors | Pages | Year |
|---|---|---|---|---|---|---|---|
| Schreiber, T. & Prange, A. & Schäfer, P. & Iwen, T. & Grützner, R. & Marillonnet, S. & Lepage, A. & Javelle, M. & Paul, W. & Tissier, A. | Efficient scar-free knock-ins of several kilobases in plants by engineered CRISPR/Cas endonucleases | Mol. Plant | 2024 | ||||
| Grützner, R. & König, K. & Horn, C. & Engler, C. & Laub, A. & Vogt, T. & Marillonnet, S. | A transient expression tool box for anthocyanin biosynthesis in Nicotiana benthamiana | Plant Biotechnol. J. | 22 | 1238-1250 | 2024 | ||
| Schreiber, T. & Tripathee, S. & Iwen, T. & Prange, A. & Vahabi, K. & Grützner, R. & Horn, C. & Marillonnet, S. & Tissier, A. | DNA double strand breaks lead to de novo transcription and translation of damage-induced long RNAs in planta | bioRxiv | 2022 | ||||
| Stellmach, H. & Hose, R. & Räde, A. & Marillonnet, S. & Hause, B. | A new set of Golden-Gate-Based organelle marker plasmids for colocalization studies in plants | Plants | 11 | 2620 | 2022 | ||
| Stuttmann, J. & Barthel, K. & Martin, P. & Ordon, J. & Erickson, J. L. & Herr, R. & Ferik, F. & Kretschmer, C. & Berner, T. & Keilwagen, J. & Marillonnet, S. & Bonas, U. | Highly efficient multiplex editing: one‐shot generation of 8× Nicotiana benthamiana and 12× Arabidopsis mutants | Plant J. | 106 | 8-22 | 2021 | ||
| Sheikh, A. H. & Fraz Hussain, R. M. & Tabassum, N. & Badmi, R. & Marillonnet, S. & Scheel, D. & Lee, J. & Sinha, A. | Possible role of WRKY transcription factors in regulating immunity in Oryza sativa ssp. indica | Physiol. Mol. Plant Pathol. | 114 | 101623 | 2021 | ||
| Püllmann, P. & Knorrscheidt, A. & Münch, J. & Palme, P. R. & Hoehenwarter, W. & Marillonnet, S. & Alcalde, M. & Westermann, B. & Weissenborn, M. J. | A modular two yeast species secretion system for the production and preparative application of unspecific peroxygenases | Commun. Biol. | 4 | 562 | 2021 | ||
| Yang, C. & Marillonnet, S. & Tissier, A. | The scarecrow-like transcription factor SlSCL3 regulates volatile terpene biosynthesis and glandular trichome size in tomato (Solanum lycopersicum) | Plant J. | 107 | 1102-1118 | 2021 | ||
| Grützner, R. & Martin, P. & Horn, C. & Mortensen, S. & Cram, E. J. & Lee-Parsons, C. W. & Stuttmann, J. & Marillonnet, S. | High-efficiency genome editing in plants mediated by a Cas9 gene containing multiple introns | Plant Communications | 2 | 100135 | 2021 | ||
| Grützner, R. & Schubert, R. & Horn, C. & Yang, C. & Vogt, T. & Marillonnet, S. | Engineering Betalain Biosynthesis in Tomato for High Level Betanin Production in Fruits | Front. Plant Sci. | 12 | 682443 | 2021 | ||
| Püllmann, P. & Knorrscheidt, A. & Münch, J. & Palme, P. R. & Hoehenwarter, W. & Marillonnet, S. & Alcalde, M. & Westermann, B. & Weissenborn, M. J. | A modular two yeast species secretion system for the production and preparative application of fungal peroxygenases | bioRxiv | 2020 | ||||
| Grützner, R. & Martin, P. & Horn, C. & Mortensen, S. & Cram, E. J. & Lee-Parsons, C. W. T. & Stuttmann, J. & Marillonnet, S. | Addition of Multiple Introns to a Cas9 Gene Results in Dramatic Improvement in Efficiency for Generation of Gene Knockouts in Plants | bioRxiv | 2020 | ||||
| Barthel, K. & Martin, P. & Ordon, J. & Erickson, J. L. & Gantner, J. & Erickson, J. L. & Herr, R. & Kretschmer, C. & Ferik, F. & Berner, T. & Keilwagen, J. & Marillonnet, S. & Stuttmann, J. & Bonas, U. | One-shot generation of duodecuple (12x) mutant Arabidopsis: Highly efficient routine editing in model species | bioRxiv | 2020 | ||||
| Ordon, J. & Bressan, M. & Kretschmer, C. & Dall’Osto, L. & Marillonnet, S. & Bassi, R. & Stuttmann, J. | Optimized Cas9 expression systems for highly efficient Arabidopsis genome editing facilitate isolation of complex alleles in a single generation | Funct. Integr. Genomics | 20 | 151-162 | 2020 | ||
| Marillonnet, S. & Grützner, R. | Synthetic DNA Assembly Using Golden Gate Cloning and the Hierarchical Modular Cloning Pipeline | Curr. Protoc. Mol. Biol. | 130 | e115 | 2020 | ||
| Grunewald, S. & Marillonnet, S. & Hause, G. & Haferkamp, I. & Neuhaus, H. E. & Veß, A. & Hollemann, T. & Vogt, T. | The Tapetal Major Facilitator NPF2.8 is Required for Accumulation of Flavonol Glycosides on the Pollen Surface in Arabidopsis thaliana | Plant Cell | 32 | 1727-1748 | 2020 | ||
| Marillonnet, S. & Werner, S. | Assembly of Multigene Constructs Using the Modular Cloning System MoClo | Methods Mol. Biol. | 2205 | DNA Cloning and Assembly | 125-141 | 2020 | |
| Grützner, R. & Marillonnet, S. | Generation of MoClo Standard Parts Using Golden Gate Cloning | Methods Mol. Biol. | 2205 | DNA Cloning and Assembly | 107-123 | 2020 | |
| Hausner, J. & Jordan, M. & Otten, C. & Marillonnet, S. & Büttner, D. | Modular Cloning of the Type III Secretion Gene Cluster from the Plant-Pathogenic Bacterium Xanthomonas euvesicatoria | ACS Synth. Biol. | 8 | 532-547 | 2019 | ||
| Püllmann, P. & Ulpinnis, C. & Marillonnet, S. & Gruetzner, R. & Neumann, S. & Weissenborn, M. J. | Golden Mutagenesis: An efficient multi-site-saturation mutagenesis approach by Golden Gate cloning with automated primer design | Sci. Rep. | 9 | 10932 | 2019 | ||
| Schubert, R. & Dobritzsch, S. & Gruber, C. & Hause, G. & Athmer, B. & Schreiber, T. & Marillonnet, S. & Okabe, Y. & Ezura, H. & Acosta, I. F. & Tarkowská, D. & Hause, B. | Tomato MYB21 Acts in Ovules to Mediate Jasmonate-Regulated Fertility | Plant Cell | 31 | 1043-1062 | 2019 | ||
| Marillonnet, S. & Werner, S. | Assembly of Complex Pathways Using Type IIs Restriction Enzymes | Methods Mol. Biol. | 1927 | Microbial Metabolic Engineering | 93-109 | 2019 | |
| Püllmann, P. & Ulpinnis, C. & Marillonnet, S. & Gruetzner, R. & Neumann, S. & Weissenborn, M. J. | Golden Mutagenesis: An efficient multi-site-saturation mutagenesis approach by Golden Gate cloning with automated primer design | bioRxiv | 2018 | ||||
| Ordon, J. & Bressan, M. & Kretschmer, C. & Dall'Osto, L. & Marillonnet, S. & Bassi, R. & Stuttmann, J. | Optimized Cas9 expression systems for highly efficient Arabidopsis genome editing facilitate isolation of complex alleles in a single generation | bioRxiv | 2018 | ||||
| Kowarschik, K. & Hoehenwarter, W. & Marillonnet, S. & Trujillo, M. | UbiGate: a synthetic biology toolbox to analyse ubiquitination | New Phytol. | 217 | 1749-1763 | 2018 | ||
| Gantner, J. & Ordon, J. & Ilse, T. & Kretschmer, C. & Gruetzner, R. & Löfke, C. & Dagdas, Y. & Bürstenbinder, K. & Marillonnet, S. & Stuttmann, J. | Peripheral infrastructure vectors and an extended set of plant parts for the Modular Cloning system | PLOS ONE | 13 | e0197185 | 2018 | ||
| Stauder, R. & Welsch, R. & Camagna, M. & Kohlen, W. & Balcke, G. U. & Tissier, A. & Walter, M. H. | Strigolactone Levels in Dicot Roots Are Determined by an Ancestral Symbiosis-Regulated Clade of the PHYTOENE SYNTHASE Gene Family | Front. Plant Sci. | 9 | 255 | 2018 | ||
| Gantner, J. & Ilse, T. & Ordon, J. & Kretschmer, C. & Gruetzner, R. & Löfke, C. & Dagdas, Y. & Bürstenbinder, K. & Marillonnet, S. & Stuttmann, J. | Peripheral infrastructure vectors and an extended set of plant parts for the modular cloning system | bioRxiv | 2017 | ||||
| Scheibner, F. & Marillonnet, S. & Büttner, D. | The TAL Effector AvrBs3 from Xanthomonas campestris pv. vesicatoria Contains Multiple Export Signals and Can Enter Plant Cells in the Absence of the Type III Secretion Translocon | Front. Microbiol. | 8 | 2180 | 2017 | ||
| Scheler, U. & Brandt, W. & Porzel, A. & Rothe, K. & Manzano, D. & Božić, D. & Papaefthimiou, D. & Balcke, G. U. & Henning, A. & Lohse, S. & Marillonnet, S. & Kanellis, A. K. & Ferrer, A. & Tissier, A. | Elucidation of the biosynthesis of carnosic acid and its reconstitution in yeast | Nat. Commun. | 7 | 12942 | 2016 | ||
| Scheibner, F. & Schulz, S. & Hausner, J. & Marillonnet, S. & Büttner, D. | Type III-Dependent Translocation of HrpB2 by a Nonpathogenic hpaABC Mutant of the Plant-Pathogenic Bacterium Xanthomonas campestris pv. vesicatoria | Appl. Environ. Microbiol. | 82 | 3331-3347 | 2016 | ||
| Dobritzsch, M. & Lübken, T. & Eschen-Lippold, L. & Gorzolka, K. & Blum, E. & Matern, A. & Marillonnet, S. & Böttcher, C. & Dräger, B. & Rosahl, S. | MATE Transporter-Dependent Export of Hydroxycinnamic Acid Amides | Plant Cell | 28 | 583-596 | 2016 | ||
| Brückner, K. & Schäfer, P. & Weber, E. & Grützner, R. & Marillonnet, S. & Tissier, A. | A library of synthetic transcription activator-like effector-activated promoters for coordinated orthogonal gene expression in plants | Plant J. | 82 | 707-716 | 2015 | ||
| Walter, M. H. & Stauder, R. & Tissier, A. | Evolution of root-specific carotenoid precursor pathways for apocarotenoid signal biogenesis | Plant Sci. | 233 | 1-10 | 2015 | ||
| Heinze, M. & Brandt, W. & Marillonnet, S. & Roos, W. | “Self” and “Non-Self” in the Control of Phytoalexin Biosynthesis: Plant Phospholipases A2 with Alkaloid-Specific Molecular Fingerprints | Plant Cell | 27 | 448-462 | 2015 | ||
| Patron, N. J. & Orzaez, D. & Marillonnet, S. & Warzecha, H. & Matthewman, C. & Youles, M. & Raitskin, O. & Leveau, A. & Farré, G. & Rogers, C. & Smith, A. & Hibberd, J. & Webb, A. A. R. & Locke, J. & Schornack, S. & Ajioka, J. & Baulcombe, D. C. & Zipfel, C. & Kamoun, S. & Jones, J. D. G. & Kuhn, H. & Robatzek, S. & Van Esse, H. P. & Sanders, D. & Oldroyd, G. & Martin, C. & Field, R. & O'Connor, S. & Fox, S. & Wulff, B. & Miller, B. & Breakspear, A. & Radhakrishnan, G. & Delaux, P.-M. & Loqué, D. & Granell, A. & Tissier, A. & Shih, P. & Brutnell, T. P. & Quick, W. P. & Rischer, H. & Fraser, P. D. & Aharoni, A. & Raines, C. & South, P. F. & Ané, J.-M. & Hamberger, B. R. & Langdale, J. & Stougaard, J. & Bouwmeester, H. & Udvardi, M. & Murray, J. A. H. & Ntoukakis, V. & Schäfer, P. & Denby, K. & Edwards, K. J. & Osbourn, A. & Haseloff, J. | Standards for plant synthetic biology: a common syntax for exchange of DNA parts | New Phytol. | 208 | 13-19 | 2015 | ||
| Marillonnet, S. & Werner, S. | Assembly of Multigene Constructs Using Golden Gate Cloning | Methods Mol. Biol. | 1321 | Glyco-Engineering | 269-284 | 2015 | |
| Engler, C. & Youles, M. & Gruetzner, R. & Ehnert, T.-M. & Werner, S. & Jones, J. D. G. & Patron, N. J. & Marillonnet, S. | A Golden Gate Modular Cloning Toolbox for Plants | ACS Synth. Biol. | 3 | 839-843 | 2014 | ||
| Schneider, J. D. & Marillonnet, S. & Castilho, A. & Gruber, C. & Werner, S. & Mach, L. & Klimyuk, V. & Mor, T. S. & Steinkellner, H. | Oligomerization status influences subcellular deposition and glycosylation of recombinant butyrylcholinesterase in Nicotiana benthamiana | Plant Biotechnol. J. | 12 | 832-839 | 2014 | ||
| Thieme, F. & Marillonnet, S. | Quick and Clean Cloning | Methods Mol. Biol. | 1116 | DNA Cloning and Assembly Methods | 37-48 | 2014 | |
| Engler, C. & Marillonnet, S. | Golden Gate Cloning | Methods Mol. Biol. | 1116 | DNA Cloning and Assembly Methods | 119-131 | 2014 | |
| Engler, C. & Marillonnet, S. | Combinatorial DNA Assembly Using Golden Gate Cloning | Methods Mol. Biol. | 1073 | Synthetic Biology | 141-156 | 2013 | |
| Werner, S. & Engler, C. & Weber, E. & Gruetzner, R. & Marillonnet, S. | Fast track assembly of multigene constructs using Golden Gate cloning and the MoClo system | Bioengineered | 3 | 38-43 | 2012 | ||
| Weber, E. & Gruetzner, R. & Werner, S. & Engler, C. & Marillonnet, S. | Assembly of Designer TAL Effectors by Golden Gate Cloning | PLOS ONE | 6 | e19722 | 2011 | ||
| Weber, E. & Engler, C. & Gruetzner, R. & Werner, S. & Marillonnet, S. | A Modular Cloning System for Standardized Assembly of Multigene Constructs | PLOS ONE | 6 | e16765 | 2011 | ||
| Thieme, F. & Engler, C. & Kandzia, R. & Marillonnet, S. | Quick and Clean Cloning: A Ligation-Independent Cloning Strategy for Selective Cloning of Specific PCR Products from Non-Specific Mixes | PLOS ONE | 6 | e20556 | 2011 | ||
| Engler, C. & Marillonnet, S. | Generation of Families of Construct Variants Using Golden Gate Shuffling | Methods Mol. Biol. | 729 | cDNA Libraries | 167-181 | 2011 | |
| Engler, C. & Gruetzner, R. & Kandzia, R. & Marillonnet, S. | Golden Gate Shuffling: A One-Pot DNA Shuffling Method Based on Type IIs Restriction Enzymes | PLOS ONE | 4 | e5553 | 2009 | ||
| Engler, C. & Kandzia, R. & Marillonnet, S. | A One Pot, One Step, Precision Cloning Method with High Throughput Capability | PLOS ONE | 3 | e3647 | 2008 |