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Publikationen - Molekulare Signalverarbeitung

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Preprints

Brunoni, F.; Široká, J.; Mik, V.; Pospíšil, T.; Kralová, M.; Ament, A.; Pernisová, M.; Karady, M.; Htitich, M.; Ueda, M.; Floková, K.; Wasternack, C.; Strnad, M.; Novák, O.; Conjugation ofcis-OPDA with amino acids is a conserved pathway affectingcis-OPDA homeostasis upon stress responses (2023) DOI: 10.1101/2023.07.18.549545

Jasmonates (JAs) are a family of oxylipin phytohormones regulating plant development and growth and mediating ‘defense versus growth’ responses. The upstream JA biosynthetic precursor cis-(+)-12-oxo-phytodienoic acid (cis-OPDA) has been reported to act independently of the COI1-mediated JA signaling in several stress-induced and developmental processes. However, its means of perception and metabolism are only partially understood. Furthermore, cis-OPDA, but not JA, occurs in non-vascular plant species, such as bryophytes, exhibiting specific functions in defense and development. A few years ago, a low abundant isoleucine analog of the biologically active JA-Ile, OPDA-Ile, was detected in wounded leaves of flowering plants, opening up to the possibility that conjugation of cis-OPDA to amino acids might be a relevant mechanism for cis-OPDA regulation. Here, we extended the analysis of amino acid conjugates of cis-OPDA and identified naturally occurring OPDA-Val, OPDA-Phe, OPDA-Ala, OPDA-Glu, and OPDA-Asp in response to biotic and abiotic stress in Arabidopsis. The newly identified OPDA-amino acid conjugates show cis-OPDA-related plant responses in a JAR1-dependent manner. We also discovered that the synthesis and hydrolysis of cis-OPDA amino acid conjugates are regulated by members of the amidosynthetase GH3 and the amidohydrolase ILR1/ILL families. Finally, we found that the cis-OPDA conjugative pathway already functions in non-vascular plants and gymnosperms. Thus, one level of regulation by which plants modulate cis-OPDA homeostasis is the synthesis and hydrolysis of OPDA-amino acid conjugates, which temporarily store cis-OPDA in stress responses.
Bücher und Buchkapitel

Wasternack, C.; Jasmonates: Synthesis, Metabolism, Signal Transduction and Action (2016) DOI: 10.1002/9780470015902.a0020138.pub2

Jasmonic acid and other fatty‐acid‐derived compounds called oxylipins are signals in stress responses and development of plants. The receptor complex, signal transduction components as well as repressors and activators in jasmonate‐induced gene expression have been elucidated. Different regulatory levels and cross‐talk with other hormones are responsible for the multiplicity of plant responses to environmental and developmental cues.
Bücher und Buchkapitel

Wasternack, C.; Jasmonates in Plant Growth and Stress Responses (Tran, L.-S. P. & Pal, S., eds.). 221-263, (2014) ISBN: 978-1-4939-0491-4 DOI: 10.1007/978-1-4939-0491-4_8

Jasmonates are lipid-derived compounds which are signals in plant stress responses and development. They are synthesized in chloroplasts and peroxisomes. An endogenous rise occurs upon environmental stimuli or in distinct stages of development such as that of anthers and trichomes or in root growth. Hydroxylation, carboxylation, glucosylation, sulfation, methylation, or conjugation of jasmonic acid (JA) leads to numerous metabolites. Many of them are at least partially biologically inactive. The most bioactive JA is the (+)-7-iso-JA–isoleucine conjugate. Its perception takes place by the SCFCOI1-JAZ-co-receptor complex. At elevated levels of JAs, negative regulators such as JAZ, or JAV are subjected to proteasomal degradation, thereby allowing positively acting transcription factors of the MYC or MYB family to switch on JA-induced gene expression. In case of JAM negative regulation takes place by anatagonism to MYC2. JA and COI1 are dominant signals in gene expression after wounding or in response to necrotrophic pathogens. Cross-talk to salicylic acid, ethylene, auxin, and other hormones occurs. Growth is inhibited by JA, thereby counteracting the growth stimulation by gibberellic acid. Senescence, trichome formation, arbuscular mycorrhiza, and formation of many secondary metabolites are induced by jasmonates. Effects in cold acclimation; in intercropping; during response to herbivores, nematodes, or necrotrophic pathogens; in pre- and post-harvest; in crop quality control; and in biosynthesis of secondary compounds led to biotechnological and agricultural applications.
Publikation

Quint, M.; Drost, H.-G.; Gabel, A.; Ullrich, K. K.; Bönn, M.; Grosse, I.; A transcriptomic hourglass in plant embryogenesis Nature 490, 98-101, (2012) DOI: 10.1038/nature11394

Animal and plant development starts with a constituting phase called embryogenesis, which evolved independently in both lineages1. Comparative anatomy of vertebrate development—based on the Meckel-Serrès law2 and von Baer’s laws of embryology3 from the early nineteenth century—shows that embryos from various taxa appear different in early stages, converge to a similar form during mid-embryogenesis, and again diverge in later stages. This morphogenetic series is known as the embryonic ‘hourglass’4,5, and its bottleneck of high conservation in mid-embryogenesis is referred to as the phylotypic stage6. Recent analyses in zebrafish and Drosophila embryos provided convincing molecular support for the hourglass model, because during the phylotypic stage the transcriptome was dominated by ancient genes7 and global gene expression profiles were reported to be most conserved8. Although extensively explored in animals, an embryonic hourglass has not been reported in plants, which represent the second major kingdom in the tree of life that evolved embryogenesis. Here we provide phylotranscriptomic evidence for a molecular embryonic hourglass in Arabidopsis thaliana, using two complementary approaches. This is particularly significant because the possible absence of an hourglass based on morphological features in plants suggests that morphological and molecular patterns might be uncoupled. Together with the reported developmental hourglass patterns in animals, these findings indicate convergent evolution of the molecular hourglass and a conserved logic of embryogenesis across kingdoms.
Bücher und Buchkapitel

Wasternack, C.; Jasmonates in Stress, Growth, and Development 91-118, (2010) ISBN: 9783527628964 DOI: 10.1002/9783527628964.ch5

This chapter contains sections titled:IntroductionJA BiosynthesisJA MetabolismBound OPDA – ArabidopsidesMutants of JA Biosynthesis and SignalingCOI1–JAZ–JA‐Ile‐Mediated JA SignalingTranscription Factors Involved in JA SignalingJasmonates and Oxylipins in DevelopmentConclusionsAcknowledgmentsReferences
Bücher und Buchkapitel

Dorka, R.; Miersch, O.; Hause, B.; Weik, P.; Wasternack, C.; Chronobiologische Phänomene und Jasmonatgehalt bei Viscum album L. 49-66, (2009)

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Publikation

Carbonell, A.; Martínez de Alba, A.-E.; Flores, R.; Gago, S.; Double-stranded RNA interferes in a sequence-specific manner with the infection of representative members of the two viroid families Virology 371, 44-53, (2008) DOI: 10.1016/j.virol.2007.09.031

Infection by viroids, non-protein-coding circular RNAs, occurs with the accumulation of 21–24 nt viroid-derived small RNAs (vd-sRNAs) with characteristic properties of small interfering RNAs (siRNAs) associated to RNA silencing. The vd-sRNAs most likely derive from dicer-like (DCL) enzymes acting on viroid-specific dsRNA, the key elicitor of RNA silencing, or on the highly structured genomic RNA. Previously, viral dsRNAs delivered mechanically or agroinoculated have been shown to interfere with virus infection in a sequence-specific manner. Here, we report similar results with members of the two families of nuclear- and chloroplast-replicating viroids. Moreover, homologous vd-sRNAs co-delivered mechanically also interfered with one of the viroids examined. The interference was sequence-specific, temperature-dependent and, in some cases, also dependent on the dose of the co-inoculated dsRNA or vd-sRNAs. The sequence-specific nature of these effects suggests the involvement of the RNA induced silencing complex (RISC), which provides sequence specificity to RNA silencing machinery. Therefore, viroid titer in natural infections might be regulated by the concerted action of DCL and RISC. Viroids could have evolved their secondary structure as a compromise between resistance to DCL and RISC, which act preferentially against RNAs with compact and relaxed secondary structures, respectively. In addition, compartmentation, association with proteins or active replication might also help viroids to elude their host RNA silencing machinery.
Bücher und Buchkapitel

Wasternack, C.; Hause, B.; Stenzel, I.; Goetz, S.; Feussner, I.; Miersch, O.; Jasmonate signaling in tomato – The input of tissue-specific occurrence of allene oxide cyclase and JA metabolites (Benning C., Ollrogge, J.). 107-111, (2007)

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Bücher und Buchkapitel

Flores, R.; Carbonell, A.; De la Peña, M.; Gago, S.; RNAs Autocatalíticos: Ribozimas de Cabeza de Martillo 407-425, (2007)

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Bücher und Buchkapitel

Wasternack, C.; Jasmonates—Biosynthesis and Role in Stress Responses and Developmental Processes 143-155, (2004) DOI: 10.1016/B978-012520915-1/50012-6

This chapter presents jasmonates and their related compounds and discusses jasmonate-induced alteration of gene expression. Jasmonates exerts two different changes in gene expression— decrease in the expression of nuclear- and chloroplast-encoded genes and increase in the expression of specific genes. Jasmonates are shown to alter sink-source relationships such as JA promotes formation of the N-rich vegetative storage proteins—VSPα and VSPβ—of soybean, including reallocation in pod filling. In addition to such nutrient reallocation to other parts of the plant, jasmonates cause decreases in photosynthesis and chlorophyll content, the most significant manifestations of senescence in leaves. The rise of endogenous jasmonates upon stress or exogenous treatment with jasmonates correlates in time with the expression of various genes. The promotion of senescence by jasmonates is counteracted by cytokinins. The capacity of jasmonates to down regulate photosynthetic genes may also be one determinant in the onset of senescence.
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